JapalitySplice

JapalitySplice is an advanced, on-device RNA-Seq alignment and splice site detection app designed for bioinformatics researchers, geneticists, and biology students. It brings powerful sequence analysis tools directly to your iPhone, enabling rapid and accurate genomic evaluations wherever you are. As transcriptome analysis and RNA sequencing become increasingly ubiquitous, the need for accessible bioinformatics tools is greater than ever. JapalitySplice addresses this by providing localized, high-performance alignment and AI models that require no active internet connection to process your sensitive data. Key Features: • Accurate RNA-Seq Alignment Perform efficient genetic sequence alignments to evaluate and map RNA data directly from your device. • Splice Site Prediction Identify essential donor and acceptor splice sites in nucleotide sequences using state-of-the-art deep learning. • Multi-Organism AI Models Comes equipped with specialized, pre-trained ONNX machine learning models for Human (GRCh38), Fruit fly (Drosophila, BDGP6), Worm (C. elegans, WBcel235), and Yeast (S. cerevisiae, R64-1-1). • FASTQ & FASTA Support Load standard FASTQ sequencing reads and FASTA reference genomes, build k-mer indices, and export SAM alignment outputs. • Clean & Intuitive Interface A streamlined workflow that makes complex bioinformatics tasks accessible, whether you are running analyses in the laboratory or studying on your commute. Whether you are performing quick quality checks on sequencing reads, studying alternative splicing events, or learning about RNA transcripts, JapalitySplice provides the computational biology power you need right in your pocket.